BioDT presents the new Digital Twin prototype to preserve honey bees’ performance and environmental biodiversity

honey bees

Honey bees (Apis mellifera) are crucial pollinators and producers. Despite their key role in agriculture, food production and security, and ultimately in human health and ecosystem well-being, they face multiple threats: habitat loss, degradation and fragmentation, pollution, pesticides, pests and pathogens, changes in land use and climate change impacts are putting at risk their survival, causing their decline worldwide. 

On May 25, BioDT presented its prototype Digital Twin (pDT) for Pollinators during the online event Biodiversity in Focus. By combining real-world data with advanced simulation techniques, the new prototype provides practical insights into honey bee performance and honey production by evaluating landscape quality. The goal of the BioDT project – in which LifeWatch ERIC is one of the partners – is to push the current boundaries of predictive understanding of biodiversity dynamics by developing a Digital Twin that provides advanced modelling, simulation, and prediction capabilities.

The DT for Pollinators aims to address honey bees’ challenges, such as intensive agriculture, diseases, and fluctuations in nectar and pollen availability. Based on the BEEHAVE model, this prototype supports use cases involving large input data, like analysing datasets from multiple countries. 

The health of honey bees depends on their environments, where consistent availability of nectar and pollen is vital, particularly during times when mass-flowering crops such as oilseed rape are not in bloom.

This Digital Twin prototype represents a fusion of advanced technology and practicality to allow a generic assessment of agricultural areas for honey bee health, says Dr Jürgen Groeneveld from the Helmholtz Centre for Environmental ResearchUFZ in Leipzig. By providing tools that are accessible, scalable, and adaptable, we aim to empower biodiversity researchers and conservationists in their mission to protect our planet’s vital ecosystems.

On the technical side, the prototype relies on a solid foundation. Custom scripts specify input data and transform it into readable input files. Researchers can deploy all necessary software components into a Docker container image on the LUMI supercomputer and cloud platforms. For more information on its development, you can consult the repository page on GitHub.

In future updates, BioDT plans to include land cover data, land cover types converted into nectar and pollen resources, and weather data, adapting it for diverse geographic areas. This way, researchers and conservationists worldwide could leverage BioDT’s capabilities in their biodiversity conservation efforts. Jesse Harrison, Developer Manager at CSC and former Project Manager of BioDT, highlighted the Pollinators DT’s potential for biodiversity conservation and announced that further versions of this prototype will expand BioDT’s mission beyond honey bee performance. He said to envision the development of further prototype Digital Twins, each addressing critical biodiversity challenges.

Test the first BioDT prototype Digital Twin on pollinator! 
Source: BioDT press release – To learn more about the Digital Twin for Pollinators and to test it, please visit this page: https://biodt.eu/news/first-operational-prototype-digital-twin-biodt

Advancing Global Energy Solutions at the first EULAC Energytran Virtual Thematic Event

energytran project

The EULAC Energytran project held its first Virtual Thematic Event on 26 and 27 June, titled “Strengthening Europe – Latin America Cooperation in the Energy Transition“. The event brought together stakeholders from Europe, North America, Latin America and the Caribbean. The participants – around two hundred – included representatives from scientific communities, universities, policymakers, research infrastructures, project managers and private sector actors, alongside the consortium partners. Our Ana Mellado and Maite Irazábal participated to represent LifeWatch ERIC’s role in the project.

This project addresses common energy challenges between the European Union, Latin America and the Caribbean. focusing on improving the sustainability of the energy transition process. The two-day virtual event covered the first two work packages of the Energytran project, about technology and policy innovation. This event is part of a broader effort to promote a sustainable and equitable energy transition in both regions. At the meeting, discussions revolved around five panels:

  1. Knowledge Exchange in Scientific Cooperation between Europe and Latin America and the Caribbean.
  2. Challenges and Opportunities in the Energy Sector.
  3. Environmental and Social Impact of Renewable Energies.
  4. Emerging Technologies for Energy Sustainability.
  5. Concentrated Solar Thermal Energy Applications.

The event concluded with key takeaways from OEI, CENAT, CSIC, PUC, and UNNE. It highlighted the importance of knowledge exchange, addressing sectoral challenges and opportunities, and considering the social and environmental impacts of energy transitions. The panels also focused on emerging technologies and applications of solar thermal energy. Ana Mellado – LifeWatch ERIC’s Project Executive Coordinator gave a conclusion regarding the role of technology and research infrastructures in the energy transition process.

The role of LifeWatch ERIC within the consortium

LifeWatch ERIC will bring its expertise in environmental monitoring and data management, contributing to the project’s transdisciplinary approach. The consortium includes prominent universities and research institutions from Argentina, Chile, Costa Rica, Spain, Mexico, and Portugal. It aims to produce over twenty deliverables, including policy recommendations, and training materials. Moreover, it will create a comprehensive inventory of research infrastructures relevant to the energy transition.
For more information about the Energytran project, please visit the official website: https://energytran.oei.int/

LifeWatch Belgium launched a new and redesigned website for an enhanced user experience

LifeWatch Belgium

LifeWatch ERIC is happy to announce the launch of the newly redesigned LifeWatch Belgium website. This platform offers a sleek, user-friendly interface and enhanced navigation, reflecting LifeWatch Belgium’s commitment to providing accessible, high-quality biodiversity and ecosystem research resources.

LifeWatch Belgium specialises in offering advanced data services and tools for biodiversity and ecosystem research. The website showcases services such as the Biodiversity Data System, Habitat Mapping, Bio-Logging, and more, supporting researchers with cutting-edge technologies and extensive datasets.

Indeed, LifeWatch Belgium’s local observatories generate long-term marine, freshwater, and terrestrial data, which is openly accessible for research. Biodiversity data systems integrate global taxonomic information, providing crucial insights into species and their habitats. Advanced bio-logging and camera trapping services facilitate the study of animal movements, while habitat mapping utilises remote sensing and geospatial analysis to characterise environmental data. The e-Lab application allows users to effortlessly standardise, analyse, and visualise data. Additionally, LifeWatch Belgium provides open-source software packages for data access and analysis and maintains a comprehensive dataset catalogue integrated into the LifeWatch ERIC Metadata Catalogue.

Furthermore, the website features inspiring user stories showcasing the diverse applications of LifeWatch Belgium’s resources. For example, the collaboration with JERICO-NEXT to study plankton in the southern North Sea, investigations into oyster larvae settlement for coastal protection, and how Marine Regions data supported the Ocean Health Index. These and other stories have already been published on the new LifeWatch Belgium website.

To access the shiny new LifeWatch Belgium website, please visit https://www.lifewatch.be/.

Sandy Beaches Symposium: the world’s leading experts gather in Lecce

The IX International Sandy Beaches Symposium was held in Lecce, Italy, on June 24-27 2024. The event was an opportunity to bring the world’s leading experts on sandy coastal ecosystems together in the city.
Past, present, and future of sandy beaches were at the center of the symposium: biodiversity loss, abundance, distribution and dynamics of species of sandy beach ecosystems, climate change impacts, anthropogenic pressures (fisheries, tourism, etc), urbanization, the key role of marine protected areas, and the challenges of creating a network between them, coastal erosion and mitigation strategies, insights from environmental DNA metabarcoding and advanced statistical models, are some of the many topics brought up for discussion by experts from all over the globe.

From Orkney sandy beaches, in Scotland, to the coastal ecosystems of Namibia and Costa Rica, to the sandy beaches of California and Apulia region: the event gathered some of the most renowned experts in the field, offering a unique opportunity to explore the latest research and developments in this disciplinary area, while illustrating to the public the importance of sandy beaches and the challenges we are facing in safeguarding these fragile and threatened ecosystems.

The symposium was an opportunity to present and discuss the state of the art in the field of sandy beach research, from a national, regional and global perspective. The event was organized by the University of Salento, with the support of LifeWatch ERIC.

Among the scientists invited as high-level keynote speakers were: Prof. John M Baxter, University of St Andrews and Heriot-Watt University; Prof. Omar Defeo, Unidad de Ciencias del Mar, Universidad de la Republica, Uruguay; Prof. Mike Elliott, Professor of Estuarine and Coastal Sciences at the University of Hull, UK; Dr. Shinji Sassa, Chair of the International Technical Committee on Scour and Erosion National Institute of Maritime, Port and Aviation Technology, Japan; Prof. Alberto Basset, Full Professor of Ecology at the University of Salento and LifeWatch ERIC Service Centre Director; Dr. Lucia Fanini, researcher at the University of Salento, etc.

To learn more about the International Sandy Beaches Symposium, please visit the dedicated website: https://isbsymposium.org/

A future for the Critical Zone? Insights from the Gran Paradiso Summer School 2024

gran paradiso summer school

From 19 to 23 June in Valsavarenche, Italy, scientists, researchers, and students from various disciplines are attending lectures, workshops, and fieldwork sessions at the Gran Paradiso Summer School. This year, the school’s theme is “Fundamental Processes in Earth System Dynamics – The Future of Critical Zone”.

Hosted at the Gran Paradiso National Park, the school aims to foster a deeper understanding of Earth Sciences, with lecturers from Europe, the United States, Japan, and Taiwan. Thanks to its interdisciplinary approach, it provides a platform for geologists, ecologists, hydrologists, and scientists working in these fields to collaborate and share their expertise. Our CEO, Christos Arvanitidis, is participating in the Summer School programme, presenting LifeWatch ERIC’s activities in the Special Seminars session.

Participants also have the opportunity to discuss multidisciplinary and cross-domain interactions, which are crucial for developing comprehensive strategies. These conversations aim to bridge the gap between scientific research and practical applications, ensuring that the knowledge gained can inform future actions and conservation efforts.

The international Gran Paradiso Summer School is organised by Timothy White (Pennsylvania State University, USA) and Antonello Provenzale (CNR IGG, Pisa, Italy, and Coordinator of the LifeWatch Italy Joint Research Unit) in the framework of the Belmont Forum ABRESO project and of the Italian project coordinating a network of national nodes from 22 Research Infrastructures (ITINERIS), in collaboration with the Gran Paradiso National Park, LifeWatch ERIC, and eLTER RI. To learn more about the school, please visit this page: https://www.thematic-school.cnr.it/about-the-summer-school/.

A postcard from the European Congress of Conservation Biology

eccb 2024

The European Congress of Conservation Biology (ECCB), organised by the Europe Section of the Society for Conservation Biology (SCB), was held in Bologna from 17 to 21 June 2024. The Congress aimed to facilitate the exchange of conservation science and nature conservation practice and policy to promote the conservation of biological diversity in Europe.

The 7th ECCB focused on achieving a biodiversity-positive status by 2030. This theme presents a positive message and a call to action towards conserving biodiversity. Despite the challenges, new protected areas were established, carbon emissions were reduced, and there is a growing awareness of biodiversity’s importance for survival.

LifeWatch ERIC joined the conference, contributing to its scientific programme and engaging with participants and researchers from Europe and beyond, thanks to its exhibition booth. Cristina Di Muri and Flavio Monti (CNR/LifeWatch Italy) presented two contributions, “Harnessing FAIR biodiversity data and services to assess incidence and habitat vulnerability to non-indigenous species in Italy” and “Enhancing biodiversity conservation analysis through data harmonization” respectively. In parallel, LifeWatch ERIC booth proved to be a valuable means to engage with over 150 representatives of the community of Conservation Biologists gathered at the event, illustrating its offer of services and science tools and understanding their needs for ICT resources, thanks to the dedicated survey administered at LifeWatch ERIC stand.

Moreover, the booth provided the opportunity to present LifeWatch ERIC’s key projects, e.g. the project Marine SABRES – Marine Systems Approaches for Biodiversity Resilience and Ecosystem Sustainability. LifeWatch ERIC illustrated Marine SABRES approaches for managing the many activities and pressures on the marine environment while presenting its user-friendly framework called a simple ‘socio-ecological system’ or ‘Simple SES’, designed and developed with the active participation of local stakeholders to make marine management clearer and more effective.
The stand was an important occasion to show some videos realised by LifeWatch Italy Multimedia Production Centre in the framework of documentary activities; research aims and results achieved so far were also presented with the help of project brochures.

Overall, the European Congress of Conservation Biology provided a platform for researchers, policymakers, and practitioners to share knowledge, exchange ideas, and collaborate toward achieving a sustainable future. By working together and taking action, we can make significant progress in conserving Earth’s biodiversity and achieving a positive biodiversity world by 2030.

For more information about the project, visit Marine SABRES official website: www.marinesabres.eu

Watch our documentary trailer on LifeWatching WebTV platform: www. lifewatching.tv/tv-show/marine-sabres/

Further details about the event can be found on the official website: www.eccb2024.eu

Semantic Academy: the registration for the LifeWatch ERIC Intensive School is now open!

In recent years, one of the major challenges in Environmental and Earth Sciences has been managing and searching larger volumes of data, collected across multiple disciplines. Many different standards, approaches, and tools have been developed to support the Data Lifecycle from Data Acquisition to Data Curation, Data Publishing, Data Processing and Data Use. In particular, modern semantic technologies provide a promising way to properly describe and interrelate different data sources in ways that reduce barriers to data discovery, integration, and exchange among biodiversity and ecosystem resources and researchers. Therefore, we are delighted to announce the launch of the 2023 edition of The Semantic Academy – The LifeWatch ERIC Intensive School: Boost your research with semantic artifacts. And this time, we are back in person!


This school is organized by LifeWatch ERIC and will take place in Lecce, from 25 to 29 September 2023.
This edition’s title is “Boost your research with semantic artifacts”. This course is built as a five-day intensive school providing the knowledge on how to create semantic artifacts for a specific domain and use them to annotate and analyse data in a Virtual Research Environment (VRE). It will cover topics such as Data Science, Semantics, Ontology, Vocabularies, Virtual Research Environments (VREs). The School is therefore mainly aimed at IT architects, Research Infrastructure (RI) service developers and user support staff, and RI staff.

The Semantic Academy will welcome participants with a welcome cocktail event and social dinner, while the actual Intensive School programme will last from Monday afternoon to Friday morning, closing with a certificate ceremony.

The outline of the School programme is as follows:

  1. Introducing the LifeWatch ERIC eScience Infrastructure
  2. Ontology Engineering
  3. Designing and Developing vocabularies
  4. Using Semantics for discovering, accessing and analysing data in the Notebook-as-a-VRE (NaaVRE)
  5. Putting everything together: practical activity with participants projects presentations

EXTENDED DEADLINE: Interested persons are invited to apply by 30 July by filling in the sign-up form here
Participation is free, but registration is compulsory. Three grants are made available by LifeWatch ERIC to support applicants younger than 30 years. Successful candidates will be offered accommodation for the whole duration of the intensive school on the basis of their motivation letter and their curricula, while travel must be self-funded. LifeWatch ERIC is an equal opportunity organisation, and encourages all qualified candidates to apply, regardless of race, gender, age, national origin, or sexual orientation. Follow LifeWatch ERIC updates!

You can access the dedicated minisite with more detailed information on the Semantic Academy here.
You can find information about other Summer Schools on Data FAIRness previously organised by LifeWatch ERIC and the ENVRI Community on our Training & Education page.

Bioinspired robots in Lecce: MAPWORMS Plenary meeting

Micro-CTvlab and MedOBIS Repository were present at the plenary meeting of the MAPWORMS project in Lecce, on 15-16 May 2023. MAPWORMS is a Horizon Europe project which aims to propose robots that are inspired by simplified forms of marine Annelida, able to perform tasks in response to environmental stimuli, thus adapting to the working environment with a shape-morphing strategy with unique features in terms of powering and eco-friendliness.

Micro-computed tomography (micro-CT) is being used to visualize the morphological and anatomical features of the annelids. These data will also be used to create a virtual gallery in the Micro-CTvlab, a virtual laboratory which was developed during the LifeWatch Greece project and offers virtual galleries and online tools for the 3D manipulation of micro-CT datasets.

Furthermore, distributional/georeferenced data produced during the MAPWORMS project, will be deposited in the MedOBIS Repository, which is the Mediterranean Node for OBIS and is hosted by the IMBBC, HCMR in Crete. Its development started in 2003, and it was operational by 2005 as a Tier 3 of EurOBIS. Under the European projects EMODnet Biology and LifeWatchGreece, it became a Tier 2 node and extended to cover the entire Mediterranean Sea. Mrs Dimitra Mavraki has been appointed as the Data Manager of the MAPWORMS project, and presented the Data Management Plan, in which several FAIR repositories, including MedOBIS, have been proposed to the partners in order to deposit their data.

The MAPWORMS project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement No 101046846.

LifeWatch ERIC at the ALL-Ready Second Regional Workshop

On 11 May, LifeWatch ERIC hosted, at its ICT Core in Seville, the second regional workshop of the European project ALL-Ready: “Accelerating Agroecology Transition: Your potential role and benefits of contributing to a European network of Living Labs and Research Infrastructures”.

LifeWatch ERIC is is one of the main partners in this highly strategically relevant project. Its Agroecology team, led by José Manuel Ávila, Daniel Caro and Iria Soto, coordinated the morning session of the workshop together with Gerald Schwarz (Thünen Institute), Isidora Stojacic (BioSense Institute), Ophélie Bonnet (INRAE), Isabelle Couture (ENoLL – European Network of Living Labs), Jo Bijttebier and Sylvie Fosselle (ILVO Living Lab Agrifood Technology).

In the presentation, Gerard Schwarz marked the objectives of the implementation plan, stressing the importance of ensuring relevance for actors across Europe and specifying that this work in progress is to be finalised in early autumn 2023:

  • To provide a structured framework to sustainably implement, monitor and adapt the European Network in the long term;
  • To ensure its effective contribution to the partnership on Agroecology;
  • To deliver benefits to the agroecological community in Europe.

During the workshop, the participants formed several groups to exchange experiences and discuss solutions about the challenges of Agroecology Living Labs and Research Infrastructures, and to explore possible roles and contributions of the European Network, in relation to:

  • Thematic priorities of the Network;
  • Communication, networking and demonstration activities;
  • Funding requirements and strategies.

The ALL-Ready workshop served also to advance the production of ideas and proposals to further improve the understanding of which thematic areas and what kind of measures and activities, as part of the European Network, would be especially useful.

The coordinator of the session, Gerard Schwarz (Thünen Institute of Farm Economics), led the working day to discuss:

▪ Insights into topics, themes and issues that the European Network should address;
▪ Insights into type of communication and networking activities that are particularly needed;
▪ Insights into practical solutions foe addressing funding gaps;
▪ Insights into capacity building, including regional gaps in competences, and the role of local actors to support development of competences.

The perspectives and recommendations of the participants will be taken into account to for the implementation plan of a European Network.

The CEO of LifeWatch ERIC, Christos Arvanitidis, intervened in the closing session. He explained that it is necessary to build all together the European Network of Agroecology Living Labs and Research Infrastructures: “And as a Research Infrastructure focused on biodiversity and ecosystem, LifeWatch ERIC aims to support the community of practices to provide science-based evidence about agroecology practices and contribute to knowledge and data sharing to demonstrate and make visible its added value and impacts”.

Christos Arvanitidis also stated that LifeWatch ERIC is working to provide digital tools / e-Services to facilitate the adoption of agroecology practices based on collaboration with the different stakeholders (researchers, farmers, policymakers and citizens), but also in association with other Research Infrastructures. And he especially stressed that: “In the coming years, in the EU Partnership on Agroecology, LifeWatch ERIC will lead the design and implementation of a conceptual framework to monitor the AE transition and the consequent impacts. We encourage to work with us, as CoP, to co-design the specific tools that fit your needs to all together contribute to the make the European agricultural sector more sustainable, resilient and responsive to societal and policy demands”.

Future workshops of ALL-Ready will be held today 12 May, in Budapest, and on Monday 15 May, in Frankfurt. All the efforts made are directed towards the final conference, which will take place on 27 September 2023, in Brussels.