BioDT presents the new Digital Twin prototype to preserve honey bees’ performance and environmental biodiversity

honey bees

Honey bees (Apis mellifera) are crucial pollinators and producers. Despite their key role in agriculture, food production and security, and ultimately in human health and ecosystem well-being, they face multiple threats: habitat loss, degradation and fragmentation, pollution, pesticides, pests and pathogens, changes in land use and climate change impacts are putting at risk their survival, causing their decline worldwide. 

On May 25, BioDT presented its prototype Digital Twin (pDT) for Pollinators during the online event Biodiversity in Focus. By combining real-world data with advanced simulation techniques, the new prototype provides practical insights into honey bee performance and honey production by evaluating landscape quality. The goal of the BioDT project – in which LifeWatch ERIC is one of the partners – is to push the current boundaries of predictive understanding of biodiversity dynamics by developing a Digital Twin that provides advanced modelling, simulation, and prediction capabilities.

The DT for Pollinators aims to address honey bees’ challenges, such as intensive agriculture, diseases, and fluctuations in nectar and pollen availability. Based on the BEEHAVE model, this prototype supports use cases involving large input data, like analysing datasets from multiple countries. 

The health of honey bees depends on their environments, where consistent availability of nectar and pollen is vital, particularly during times when mass-flowering crops such as oilseed rape are not in bloom.

This Digital Twin prototype represents a fusion of advanced technology and practicality to allow a generic assessment of agricultural areas for honey bee health, says Dr Jürgen Groeneveld from the Helmholtz Centre for Environmental ResearchUFZ in Leipzig. By providing tools that are accessible, scalable, and adaptable, we aim to empower biodiversity researchers and conservationists in their mission to protect our planet’s vital ecosystems.

On the technical side, the prototype relies on a solid foundation. Custom scripts specify input data and transform it into readable input files. Researchers can deploy all necessary software components into a Docker container image on the LUMI supercomputer and cloud platforms. For more information on its development, you can consult the repository page on GitHub.

In future updates, BioDT plans to include land cover data, land cover types converted into nectar and pollen resources, and weather data, adapting it for diverse geographic areas. This way, researchers and conservationists worldwide could leverage BioDT’s capabilities in their biodiversity conservation efforts. Jesse Harrison, Developer Manager at CSC and former Project Manager of BioDT, highlighted the Pollinators DT’s potential for biodiversity conservation and announced that further versions of this prototype will expand BioDT’s mission beyond honey bee performance. He said to envision the development of further prototype Digital Twins, each addressing critical biodiversity challenges.

Test the first BioDT prototype Digital Twin on pollinator! 
Source: BioDT press release – To learn more about the Digital Twin for Pollinators and to test it, please visit this page: https://biodt.eu/news/first-operational-prototype-digital-twin-biodt

Fund raising

  • End of January 2025 – Establishing a WG Committee on scouting project application opportunities and fundraising

Organising WG workshops and conferences

  • End of January 2025 – Setting priority research lines and contributions to the BEeS 2025 LifeWatch Conference for the session on the “Ecological responses to climate change”
  • March/April 2025 (TBD) – Workshop ‘Ecological modelling and eco-informatics to address functional responses of biodiversity and ecosystems to climate change’ co-organized with the University of Salento
  • 30 June – 3 July 2025 – Participation to LifeWatch 2025 BEeS Conference on “Addressing the Triple Planetary Crisis”

Implementing services

  • End of January 2025 – Internal distribution of a questionnaire on the most used/relevant model resources in the WG member research activity
  • February 2025 (TBD) – Online working table on setting priorities, timeline and milestones for the mapping service and model requirements by scientists and science stakeholders

Mapping user requirements

  • End of January 2025 – Catalogue of services already available in LifeWatch ERIC or research lines addressing ecological responses to climate change
  • February 2025 (TBD) – Online working table on setting priorities, timeline and milestones for the mapping service and model requirements by scientists and science stakeholders
Bulgaria

The Bulgarian National Distributed Centre is represented by the  Agricultural University-Plovdiv.

To know more about how Bulgaria contributes to LifeWatch ERIC, please visit our dedicated webpage.

Spain

The Spanish National Distributed Centre is supported by the Ministry of Science, Innovation and Universities, the Regional Government of Andalusia and the Guadalquivir River Basin Authority (Ministry for Ecological Transition-MITECO). Moreover, Spain is the hosting Member State of LifeWatch ERIC, the location of its Statutory Seat & ICT e-Infrastructure Technical Office (LifeWatch ERIC Common Facilities). 

To know more about how Spain contributes to LifeWatch ERIC, please visit our dedicated webpage.

Slovenia

The Slovenian National Distributed Centre is led by the Research Centre of the Slovenian Academy of Sciences and Arts (ZRC SAZU). It focuses on the development of technological solutions in the field of biodiversity and socio-ecosystem research.

To know more about how Slovenia contributes to LifeWatch ERIC, please visit our dedicated webpage.

Portugal

The Portuguese National Distributed Centre is managed by PORBIOTA, the Portuguese e-Infrastructure for Information and Research on Biodiversity. Led by BIOPOLIS/CIBIO-InBIO – Research Centre in Biodiversity and Genetic Resources, PORBIOTA connects the principal Portuguese research institutions working in biodiversity.

To know more about how Portugal contributes to LifeWatch ERIC, please visit our dedicated webpage.

Netherlands

The Dutch National Distributed Centre is hosted by the Faculty of Science of the University of Amsterdam. Moreover, The Netherlands hosts one of the LifeWatch ERIC Common Facilities, the Virtual Laboratory and Innovation Centre.

To know more about how The Netherlands contributes to LifeWatch ERIC, please visit our dedicated webpage.

Italy

The Italian National Distributed Centre is led and managed by the Italian National Research Council (CNR) and is coordinated by a Joint Research Unit, currently comprising 35 members. Moreover, Italy hosts one of the LifeWatch ERIC Common Facilities, the Service Centre.

To know more about how Italy contributes to LifeWatch ERIC, please visit our dedicated webpage.

Greece

The Greek National Distributed Centre is funded by the Greek General Secretariat of Research and Technology and is coordinated by the Institute of Marine Biology, Biotechnology and Aquaculture of the Hellenic Centre for Marine Research, in conjunction with 47 associated partner institutions.

To know more about how Greece contributes to LifeWatch ERIC, please visit our dedicated webpage.

Belgium

The Belgian National Distributed Centre makes varied and complementary in-kind contributions to LifeWatch ERIC. These are implemented in the form of long-lasting projects by various research centres and universities distributed throughout the country and supported by each respective political authority.

To know more about how Belgium contributes to LifeWatch ERIC, please visit our dedicated webpage.